Changes in Version 11.1

Major Changes

Minor Changes

  • Fixed a server problem with hanging backup process that can occur with v11.0.0/1.
  • Fixed issue with SPAdes assemblies and MOB-Suite.
  • Fixed issue with ENA submission behind proxy servers.
  • Allow to run ONT pipelines without downsampling and reference genome.
  • Renamed task template E. coli NCBI AMRFinderPlus into STEC NCBI AMRFinderPlus (when newly downloaded)
  • Some further small improvements and bug fixes.

Changes in Version 11.0

Major Changes

Minor Changes

  • Updated SPAdes de novo assembler to version 4.2.0.
  • Added option to overwrite default BLAST gap penalty settings in task template.
  • Improved installer for updating old SeqSphere installations.
  • Added warning dialog when adding task templates to project without BIGSdb account.
  • Handle changed MLST scheme names on PubMLST.org/Pasteur MLST (e.g., Enterobacter).
  • Fixed issue with pyGenomeViz.
  • Checkbox 'Remove Empty' in comparison table dialog now only affects epi/procedure fields, not task fields.
  • Some further small improvements and bug fixes.


For older versions see complete version history.

 
FOR RESEARCH USE ONLY. NOT FOR USE IN CLINICAL DIAGNOSTIC PROCEDURES.