Seqsphere task template choose assembly parameters.png

The Target Parameters window allows to define the parameters

The first three sections are only available for Sanger sequencing data:

Read Calling
defines the base and quality calling for chromatogram sequences
Read Trimming
defines the trimming of the read sequences according to length, qualities or ambiguous bases.
Read Assembling
defines the settings for the built-in assembler for first-gen sequence data.


The following three section are available for any kind of sequence data:

Reference Sequence
defines the settings for the reference sequence
Target Analysis
defines the automatically performed analysis that will be processed for each target
View Settings
defines some defaults for the shown GUI components of this Task Template

By default the Target Analysis panel is shown.

See a detailed description of the different parameter sections in chapter Target Parameters.