This function can be used to export assembly contigs to files (FASTA) together with metadata.

The following options can be selected when exporting the files:

  • Export procedure details into SPEC files

If enabled, for each exported contigs file the available procedure details are stored in a SPEC file with the same name.
  • Export epi metadata into SPEC files

If enabled, for each exported contigs file the available epi metadata are stored in a SPEC file with the same name.
  • Export tags into SPEC files

If enabled, for each exported contigs file the tags assifned to the sample are stored in a SPEC file with the same name.
  • Export ACE/BAM files if available

If enabled, instead of a FASTA file the ACE/BAM file of a sample is exported if it is available.
  • Create sub-folder for each Project
If enabled, each file is written into a sub-folder with the name of the project of the sample.
  • Use Alias ID instead of Sample ID as name
If enabled, the field "Alias ID" is used as file name. The Sample ID will not be written to the file.
  • Include Sample name in contig sequence names
If enabled, the Sample names (Sample ID or Alias ID) are used for each sequence name in the exported contig files.