This function can be used to export assembly contigs to files (FASTA) together with metadata.
The following options can be selected when exporting the files:
- Export procedure details into SPEC files
- If enabled, for each exported contigs file the available procedure details are stored in a SPEC file with the same name.
- Export epi metadata into SPEC files
- If enabled, for each exported contigs file the available epi metadata are stored in a SPEC file with the same name.
- Export tags into SPEC files
- If enabled, for each exported contigs file the tags assifned to the sample are stored in a SPEC file with the same name.
- Export ACE/BAM files if available
- If enabled, instead of a FASTA file the ACE/BAM file of a sample is exported if it is available.
- Create sub-folder for each Project
- If enabled, each file is written into a sub-folder with the name of the project of the sample.
- Use Alias ID instead of Sample ID as name
- If enabled, the field "Alias ID" is used as file name. The Sample ID will not be written to the file.
- Include Sample name in contig sequence names
- If enabled, the Sample names (Sample ID or Alias ID) are used for each sequence name in the exported contig files.